RX1330M3 E3-1230 v6 3.5GHz 4C8T 224.0GFLOPS
18/11/06 13:06:26 [M::bwa_idx_load_from_disk] read 0 ALT contigs [M::process] read 1815774 sequences (80000053 bp)... [M::process] read 1833396 sequences (80000011 bp)... [M::mem_process_seqs] Processed 1815774 reads in 69.270 CPU sec, 10.917 real sec [M::process] read 1827330 sequences (80000067 bp)... [M::mem_process_seqs] Processed 1833396 reads in 72.403 CPU sec, 11.981 real sec [M::process] read 1837492 sequences (80000005 bp)... [M::mem_process_seqs] Processed 1827330 reads in 72.093 CPU sec, 11.749 real sec [M::process] read 419113 sequences (18201018 bp)... [M::mem_process_seqs] Processed 1837492 reads in 70.634 CPU sec, 11.775 real sec [M::mem_process_seqs] Processed 419113 reads in 16.366 CPU sec, 3.573 real sec [main] Version: 0.7.17-r1188 [main] CMD: bwa mem -t8 Trinity-GG MNt_1_trim.fastq.gz [main] Real time: 54.819 sec; CPU: 303.178 sec 18/11/06 13:07:21
55 sec
RX300S7 E5-2667 2.9GHz 6C12T*2 139.2GFLOPS/cpu
18/11/06 13:04:24 [M::bwa_idx_load_from_disk] read 0 ALT contigs [M::process] read 5476498 sequences (240000039 bp)... [M::mem_process_seqs] Processed 5476498 reads in 283.738 CPU sec, 42.144 real sec [M::process] read 2256607 sequences (98201115 bp)... [M::mem_process_seqs] Processed 2256607 reads in 119.757 CPU sec, 12.516 real sec [main] Version: 0.7.17-r1188 [main] CMD: bwa mem -t24 Trinity-GG MNt_1_trim.fastq.gz [main] Real time: 72.568 sec; CPU: 415.462 sec 18/11/06 13:05:37
73 sec
RX300S7 E5-2643 3.3GHz 4C8T*2 105.6GFLOPS/cpu
18/11/06 12:54:28 [M::bwa_idx_load_from_disk] read 0 ALT contigs [M::process] read 3649170 sequences (160000064 bp)... [M::mem_process_seqs] Processed 3649170 reads in 185.107 CPU sec, 37.522 real sec [M::process] read 3664822 sequences (160000072 bp)... [M::process] read 419113 sequences (18201018 bp)... [M::mem_process_seqs] Processed 3664822 reads in 189.660 CPU sec, 28.777 real sec [M::mem_process_seqs] Processed 419113 reads in 21.859 CPU sec, 3.837 real sec [main] Version: 0.7.17-r1188 [main] CMD: bwa mem -t16Trinity-GG MNt_1_trim.fastq.gz [main] Real time: 84.943 sec; CPU: 406.781 sec 18/11/06 12:55:53
85 sec
RX200S7 E5-2620 2.00GHz 6C12T*2 96.0GFLOPS/cpu
18/11/06 13:18:06 [M::bwa_idx_load_from_disk] read 0 ALT contigs [M::process] read 5476498 sequences (240000039 bp)... [M::mem_process_seqs] Processed 5476498 reads in 395.009 CPU sec, 58.175 real sec [M::process] read 2256607 sequences (98201115 bp)... [M::mem_process_seqs] Processed 2256607 reads in 165.597 CPU sec, 17.457 real sec [main] Version: 0.7.17-r1188 [main] CMD: bwa mem -t24 Trinity-GG MNt_1_trim.fastq.gz [main] Real time: 98.595 sec; CPU: 576.243 sec 18/11/06 13:19:45
99 sec
RX200S6 E5630 2.54GHz 4C8T*2 no-data
18/11/06 13:01:24 [M::bwa_idx_load_from_disk] read 0 ALT contigs [M::process] read 3649170 sequences (160000064 bp)... [M::mem_process_seqs] Processed 3649170 reads in 247.487 CPU sec, 49.641 real sec [M::process] read 3664822 sequences (160000072 bp)... [M::process] read 419113 sequences (18201018 bp)... [M::mem_process_seqs] Processed 3664822 reads in 241.258 CPU sec, 36.402 real sec [M::mem_process_seqs] Processed 419113 reads in 27.730 CPU sec, 4.817 real sec [main] Version: 0.7.17-r1188 [main] CMD: bwa mem -t16Trinity-GG MNt_1_trim.fastq.gz [main] Real time: 109.888 sec; CPU: 529.980 sec 18/11/06 13:03:14
110 sec
ということでスペック通り
E3-1230 v6 > E5-2667 > E5-2643 > E5-2620 > E5630
multi cpuは単純にflops*cpu数にはやっぱりならんのな。
